BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019G07LP1|AL427525
(991 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 1591 0.0
3x_Contig943 177 4e-44
3x_Contig1755 106 1e-22
>3x_Contig1682
Length = 16889
Score = 1591 bits (782), Expect = 0.0
Identities = 901/964 (93%), Gaps = 1/964 (0%)
Strand = Plus / Plus
Query: 28 cgacaagakcggaggccatgtcatttttcgatggaattttctagaatgaaatagtataca 87
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 cgacaagatctgaggccatgtcatttttcgatggaattttctagaatgaaatagtataca 62
Query: 88 aatktktcgctcgagaaagtgaaaaagtgttgacatactgcactggaggcaaagaggatg 147
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aatttttcgctcgagaaagtgaaaaagtgttgacatactgcactggaggcaaagaggatg 122
Query: 148 gacaaagtaacactggaatagaatkatataaraagagacagattcagtgaactttgaaag 207
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 123 gacaaagtaacactggaatagaattatataaaaagagacagattcagtgaactttgaaag 182
Query: 208 aatgtttcttggaagggtatcgttactactttcttcaatkaakacccaatkagtttagka 267
|||||||||||||||| |||||||||||||||||||||| || ||||||| ||||||| |
Sbjct: 183 aatgtttcttggaaggttatcgttactactttcttcaattaatacccaattagtttagta 242
Query: 268 agtgatatakatgkgtcattktctcaatktcagaaaattgagacgckagtgagttagtga 327
||||||||| || |||||| ||||||| ||||||||||||||||| ||| ||||||| |
Sbjct: 243 agtgatatatatttgtcattttctcaatttcagaaaattgagacgctagttagttagtta 302
Query: 328 ggattgakttacaaaggataagatkakackcctaakkkcckaaaccatckatcttccatk 387
||||||| ||||||||||||| || | || ||||| || |||||||| |||||||||
Sbjct: 303 ggattgatttacaaaggataatattatactcctaatttcctaaaccatctatcttccatt 362
Query: 388 atatctctatgckgtgckgaatatckttgataaagkgtgaaraacttaagaagacttcaa 447
|||||||||| | || | ||||||| || |||||| | || ||||||||||||||||||
Sbjct: 363 atatctctattctgttctgaatatcttttataaagttttaaaaacttaagaagacttcaa 422
Query: 448 tgaagkktacaggaaaccccacatkatcaaagaacakacaaacgarakgataatgtctaa 507
| || ||||||||||||||||| |||||| |||| |||||||| | |||||||||||
Sbjct: 423 ttaattttacaggaaaccccacattatcaaataacatacaaacgaaattataatgtctaa 482
Query: 508 ggctgtggggattgatttgggtaccactgactcatgtgtggcgcacttttctaacgaccg 567
|||||| || |||||||||||||||||| |||||||||| || |||||||||||||||||
Sbjct: 483 ggctgttggtattgatttgggtaccacttactcatgtgttgctcacttttctaacgaccg 542
Query: 568 tgtcgaaatkgtggctaacgaccaagggaacagaactaccccatcggttgtcgctttcac 627
||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 543 tgtcgaaattttggctaacgaccaaggtaacagaactaccccatcttttgtcgctttcac 602
Query: 628 cgacactgaaagattgattggtgatgctgccaagaaccaagctgctatgaacccagccaa 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 cgacactgaaagattgattggtgatgctgccaagaaccaagctgctatgaacccagccaa 662
Query: 688 cactgttttcgatgctaagcgtttgattggtagaaacttcagtgacgcagaagttcaagg 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 cactgttttcgatgctaagcgtttgattggtagaaacttcagtgacgcagaagttcaagg 722
Query: 748 tgatatcaagcacttcccattcaaggtcattgacgttgctggtaagccacaagtcgaagt 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 tgatatcaagcacttcccattcaaggtcattgacgttgctggtaagccacaagtcgaagt 782
Query: 808 cgaatacaagggtgaaaacaaggttttcaccccagaagaaatctcctctatgattttgag 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 cgaatacaagggtgaaaacaaggttttcaccccagaagaaatctcctctatgattttgag 842
Query: 868 ttagatgaaggaaactgctgaatcttacttkgggttgcaaggttaacgacgctgtcgtta 927
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 843 taagatgaaggaaactgctgaatcttactt-gggttgcaaggttaacgacgctgtcgtta 901
Query: 928 ccgttccagcttactttaacgattctcaaagacaagctaccaaggatgcyggtaccattg 987
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 902 ccgttccagcttactttaacgattctcaaagacaagctaccaaggatgctggtaccattg 961
Query: 988 ctgg 991
||||
Sbjct: 962 ctgg 965
>3x_Contig943
Length = 2708
Score = 177 bits (87), Expect = 4e-44
Identities = 164/189 (86%), Gaps = 1/189 (0%)
Strand = Plus / Plus
Query: 803 gaagtcgaatacaagggtgaaaacaaggttttcaccccagaagaaatctcctctatgatt 862
||||| |||||||||||||||| || || |||| ||||||||||| || |||||| |
Sbjct: 452 gaagttgaatacaagggtgaaactaaagtgttcagtccagaagaaatttcttctatggtc 511
Query: 863 ttgagttagatgaaggaaactgctgaatcttacttkgggttgcaaggttaacgacgctgt 922
|| ||| ||||||||||||| |||||| ||||||| || | ||| ||||| ||||||||
Sbjct: 512 ttaagtaagatgaaggaaaccgctgaagcttacttagg-taccaaagttaatgacgctgt 570
Query: 923 cgttaccgttccagcttactttaacgattctcaaagacaagctaccaaggatgcyggtac 982
||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||
Sbjct: 571 tgttaccgttccagcttatttcaacgattctcaaagacaagctaccaaggatgctggtac 630
Query: 983 cattgctgg 991
|||||||||
Sbjct: 631 cattgctgg 639
Score = 132 bits (65), Expect = 1e-30
Identities = 86/93 (92%)
Strand = Plus / Plus
Query: 626 accgacactgaaagattgattggtgatgctgccaagaaccaagctgctatgaacccagcc 685
||||| || |||||||||||||||||||| || ||||||||||||||||| |||||| |
Sbjct: 275 accgatacagaaagattgattggtgatgcagcaaagaaccaagctgctatcaacccatca 334
Query: 686 aacactgttttcgatgctaagcgtttgattggt 718
|||||||||||||||||||||||||||||||||
Sbjct: 335 aacactgttttcgatgctaagcgtttgattggt 367
>3x_Contig1755
Length = 22936
Score = 106 bits (52), Expect = 1e-22
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 918 gctgtcgttaccgttccagcttactttaacgattctcaaagacaagctaccaaggatgcy 977
|||||||||||||| ||||||||||| |||||| ||||||||||||| |||||||||||
Sbjct: 16597 gctgtcgttaccgtcccagcttacttcaacgatgctcaaagacaagccaccaaggatgct 16538
Query: 978 ggtaccattgctgg 991
||| ||||||||||
Sbjct: 16537 ggtgccattgctgg 16524
Score = 106 bits (52), Expect = 1e-22
Identities = 79/88 (89%)
Strand = Plus / Minus
Query: 635 gaaagattgattggtgatgctgccaagaaccaagctgctatgaacccagccaacactgtt 694
||||||||||| ||||||||||| ||||||||||||||| |||||||| ||||| ||
Sbjct: 16879 gaaagattgatcggtgatgctgctaagaaccaagctgctttgaacccaaaaaacaccgtc 16820
Query: 695 ttcgatgctaagcgtttgattggtagaa 722
||||||||||||||||| ||||||||||
Sbjct: 16819 ttcgatgctaagcgtttaattggtagaa 16792
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5051
Number of Sequences: 1807
Number of extensions: 5051
Number of successful extensions: 122
Number of sequences better than 1.0e-20: 3
length of query: 991
length of database: 10,358,551
effective HSP length: 16
effective length of query: 975
effective length of database: 10,329,639
effective search space: 10071398025
effective search space used: 10071398025
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.1 bits)